BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009C09LP1|AL426008
(818 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1802 1579 0.0
>3x_Contig1802
Length = 45229
Score = 1579 bits (796), Expect = 0.0
Identities = 812/818 (99%)
Strand = Plus / Minus
Query: 1 gtgacggaatcttaaatgagccaaatttatggcaaaccaacagaatagagtagataaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6639 gtgacggaatcttaaatgagccaaatttatggcaaaccaacagaatagagtagataaacc 6580
Query: 61 agataacgcactcaaccaagtgaaaacttcgtcacgcttattactagcagcaatgaacga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6579 agataacgcactcaaccaagtgaaaacttcgtcacgcttattactagcagcaatgaacga 6520
Query: 121 caataaaccaaccaagagagttatagcaattgcgtacaatggtctacctttcttgtcaac 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 6519 caataaaccaaccaagagagtaatagcaattgcgtacaatggtctacctttcttgtcaac 6460
Query: 181 atgggccaaagaacgaggtaaattaccaatttctgccattgagataatacatcttgaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6459 atgggccaaagaacgaggtaaattaccaatttctgccattgagataatacatcttgaaca 6400
Query: 241 tgcgttaacggcactgttagctacagacaagagtgcaatcaaaataatggcattcatcaa 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6399 tgcgtaaacggcactgttagctacagacaagagtgcaatcaaaataatggcattcatcaa 6340
Query: 301 ggatggtaaccctttaataccaccattctgaatggcaataactaatggtgacgcagcagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6339 ggatggtaaccctttaataccaccattctgaatggcaataactaatggtgacgcagcagc 6280
Query: 361 atcaacggatgaggtaccgttcaacaataaaggatcgttggatggaacaagacacccgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6279 atcaacggatgaggtaccgttcaacaataaaggatcgttggatggaacaagacacccgat 6220
Query: 421 caaagtcaagatgaccaaataactcatagtgatcaaccagaatgttctcttagcagcttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6219 caaagtcaagatgaccaaataactcatagtgatcaaccagaatgttctcttagcagcttt 6160
Query: 481 tggcaaagttactcttggatttctggattctgcagctgaaacaccgaccaattccaatcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6159 tggcaaagttactcttggatttctggattctgcagctgaaacaccgaccaattccaatcc 6100
Query: 541 cgaataggagaaagcagctgtgatgaacactgcagacaatcccttgaaacgctgagctgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6099 cgaataggagaaagcagctgtgatgaacactgcagacaatcccttgaaacgctgagctgg 6040
Query: 601 agtatcacccacaaaggcgccaggatcattccagttcttcccacctataaagccaccgga 660
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 6039 agtatcacccacaaaggcgccaggatcattccagtacttcccacctataaagccaccgga 5980
Query: 661 tggaccacctccacagattaawacgatccccagaatagtgaacccaatgatggcaagaat 720
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 5979 tggaccacctccacagattaaaacgatccccagaatagtgaacccaatgatggcaagaat 5920
Query: 721 tttcaccatagacaagacaaattcagtttcaccgaatgatttaacatccagcatgttggc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5919 tttcaccatagacaagacaaattcagtttcaccgaatgatttaacatccagcatgttggc 5860
Query: 781 aaaagcgatacaaacgtagaatatactgacccaagcat 818
|||||||||| ||||||||||||||||||||||||||
Sbjct: 5859 aaaagcgatagcaacgtagaatatactgacccaagcat 5822
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5143
Number of Sequences: 1807
Number of extensions: 5143
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 818
length of database: 10,358,551
effective HSP length: 16
effective length of query: 802
effective length of database: 10,329,639
effective search space: 8284370478
effective search space used: 8284370478
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)